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As you've discovered, bad things happen when you run out of space. I would suggest downing your Lotus Domino server and removing any *.tmp files and the log.nsf. The log might be corrupt, and if so, you won't be able to write any transactions. This also will cause errors.
The worst-case scenario is that the mail files might need to be compacted or restored from tape. This situation is an example of why it's important to have proper monitors running against your Lotus Domino server and hardware. Situations like this can cripple you for days while you try to repair the problem.
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